Home    Instructions    Contact
Instruction on query file format

The query file should follow the format of the examples provided in the following. It should contain two columns: gene symbol and logarithm fold change. The gene symbols must follow the order defined in genes.txt. The logarithm expression fold changes (treated vs. control; BRCA vs. normal) are calculated from expression profiles, preferably generated by Affymatrix HG-U133A microarray (GPL96) platform. A zero value can be filled for a gene symbol if the fold change is not available.

Examples of the query data file

GSE4025_e2_query.txt

GSE2740_patient1_query.txt

GSE33366_BMS_75487_query.txt